Bestsel

BeStSel (Beta Structure Selection) is a novel method for the secondary structure determination and fold recognition from protein circular dichroism spectra.

		Single spectrum analysis and fold recognition
		Secondary structure determination distinguishing parallel beta-sheets and antiparallel beta-sheets of different twists, and fold recognition from the CD spectrum.

Fold recognition
Prediction of fold class, architecture, topology and homology for the provided secondary structure contents.

		Multiple spectra analysis
		Analysis of a series of spectra as a function of temperature, time, ligand concentration, etc.

Secondary structure and beta-sheet decomposition for PDB structures
Secondary structure composition of protein structures deposited in PDB on the basis of the eight structural element decomposed by BeStSel. For comparison, DSSP data and Selcon3 decomposition is also calculated.

Terms & conditions

References: Micsonai et al. Nucleic Acids Res. 46:W315-22 (2018), Micsonai et al. PNAS 112:E3095-103 (2015) NEW: Protein Extinction Coefficient Calculator (for 205 and 214 nm).
Title: (optional)	BeStSel TUTORIAL (PDF, 2.1 MB)
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	Input format: Please enter two data columns, wavelength and CD data. Separator can be space, tab, comma or semicolon. Please use dot as decimal point. Example: 175 -0.47423 176 -0.35859 177 -0.25112 ... Sample spectrum (in delta epsilon)
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